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Juan Marcos Alarcon, PhD

Assistant Professor

Department of Pathology, Division of Neuroscience

Office location: 4-113

Lab Tel: (718) 221- 5325

Office Tel:(718)613-8348

Fax: (718) 270-3313







Research Interest Summary
Synaptic Plasticity, Encoding, Learning and Memory.

Modern physiological and molecular biological studies have shown that enduring changes in synaptic efficacy, a process known as synaptic plasticity, is a fundamental neuronal process underlying various forms of learning and memory. Research in this area has provided useful insights into how the expression of a given type of synaptic plasticity modulates and perhaps reconfigures the activity of the neural network in which this occurs. In the brain most neurons receive multiple synaptic inputs which are potentially capable of inducing synaptic plasticity. This raises a question central to an understanding of how information is processed and stored within a given neuronal circuit, i.e., how are two or more forms of synaptic plasticity integrated at the level of a single neuron?
Our work focuses on an examination of the functional properties of the interaction between distinct forms of synaptic plasticity elicited within a neuron. A neuron expressing multiple forms of synaptic plasticity might selectively encode new incoming information and, thus, dramatically modulate both the way that it filters relevant from irrelevant information as well as the way that it exports this information to other cells. We attempt to address the following questions:

1) How does a neuron integrate various forms of synaptic plasticity elicited in multiple synapses?
2) What are the cellular and molecular mechanisms underlying this process?
3) What impact does this process have on signal integration at neuronal and network level?
4) And, most importantly, is this process relevant for the encoding of memories?

We expect to obtain insights into the functional significance of specific synaptic plasticity associations or interactions between synaptic inputs arriving from different brain regions. The understanding of the rules that result in the prevalence or dismissal of certain forms of synaptic plasticity within a neuron could provide additional insights into the cellular basis of learned behavior.


Lab projects
Synaptic Plasticity Interactions within and between CA1 Dendritic Compartments
Functional Significance of Synaptic Plasticity Interactions
Synaptic Plasticity Correlates of the Cognitive Map
Role of PARP-1 in Learning and Memory



Selected Publications

Gaël Malleret, Juan M. Alarcon, Guillaume Martel, Shuichi Takizawa, Svetlana Vronskaya, Deqi Yin, Irene Z. Chen, Eric R. Kandel and Gleb P. Shumyatsky. (2010) Bidirectional regulation of hippocampal long-term synaptic plasticity and its influence on opposing forms of memory. J Neurosci. 30(10):3813-25.

Barco A., Lopez de Armentia M, and Alarcon JM. (2008) Synapse-specific stabilization of plasticity processes: The synaptic tagging and capture hypothesis revisited ten years later. Neuroscience & Biobehavioral Reviews. 32(4):831-851.

Nicholls, R.E., Alarcon, J.M., Malleret, G., Vronskaya, S., Grody, M.B. and Kandel, E.R. (2008) Transgenic mice lacking NMDAR-dependent LTD exhibit deficits in behavioral flexibility. Neuron. 58(1):104-17.

Alarcon JM, Barco A and Kandel E.R. (2006) Capture of L-LTP within and across the apical and basilar dendritic compartments of CA1 pyramidal neurons: synaptic tagging is compartment restricted. J. Neurosci. 26(1):256-64.
Etkin A, Alarcón JM, Weisberg S.P, Touzani K, Huang Y-Y, Nordheim A and Kandel E.R. (2006) A role in learning for SRF: deletion in the adult forebrain disrupts LTD and the formation of an immediate memory of a novel context. Neuron. 50(1):127-143.

Alarcon JM, Hodgman R, Theis M, Huang Y-S, Kandel E.R. and Richter J.D. (2004) Selective modulation of some forms of Schaffer collateral-CA1 synaptic plasticity in mice with a disruption of the CPEB-1 gene. Learning & Memory. 11:318-327.